Journal Paper

1. "Rarity of Pseudomonas agarici on Edible Mushrooms Associated with Susceptibility to Biological Competition"
   Mahsa Moallem, Mozhde Hamidizade, Seied Mohsen Taghavi, Milad Aeini, حمید عباچی, Shahrad Haghighi, Ardavan Soleimani, Kevin L. Hockett, Carolee T. Bul, Ebrahim Osdaghi
   PLANT DISEASE, Vol. 108, No 9, 2024
2. "Molecular-Phylogenetic Characterization of Xanthomonas hortorum pv. pelargonii Strains Causing Leaf Spot of Geraniums in Iran"
   Iman Haghshenas, Seied Mohsen Taghavi, Sadegh Zarei, Ebrahim Osdaghi
   PLANT DISEASE, Vol. 108, No 9, 2024
3. "Unraveling the genetic basis of quantitative resistance to diseases in tomato: a meta-QTL analysis and mining of transcript profiles"
   Moein Khojasteh, Hadi Darzi Ramandi, S. Mohsen Taghavi, Ayat Taheri, Asma Rahmanzadeh, Gongyou Chen, Majid R. Foolad, Ebrahim Osdaghi
   PLANT CELL REPORTS, Vol. 43, No 7, 2024
4. "Multiphasic investigations imply transfer of orange-/red-pigmented strains of the bean pathogen Curtobacterium flaccumfaciens pv. flaccumfaciens to a new species as C. aurantiacum sp. nov., elevation of the poinsettia pathogen C. flaccumfaciens pv. poinsettiae to the species level as C. Poinsettiae sp. nov., and synonymy of C. albidum with C. citreum"
   Ebrahim Osdaghi, Mohsen Taghavi, Mozhde Hamidizade, Mohammad Mahdi Kariminezhad, Amal Fazliarab, Habibeh Hajian Maleki, Steve Baeyen, Geraldine Taghouti, Marie-Agnes Jacques, Johan Van Vaerenbergh, Perrine Portier
   Systematic and Applied Microbiology, Vol. 47, 2024
5. "Clavibacter tessellarius causing bacterial mosaic of wheat establishes in the Old World"
   Mostafa Nasiri, Mohammad Mehdi Faghihi, Heshmat Rahimian, Ebrahim Osdaghi
   Plant Pathology, Vol. 112, No 3, 2024
6. "Wild mushrooms as potential reservoirs of plant pathogenic bacteria: a case study on Burkholderia gladioli"
   Mozhde Hamidizade, S Mohsen Taghavi, Ardavan Soleimani, Mohammad Bouazar, Hamid Abachi, Perrine Portier, Ebrahim Osdaghi
   Microbiology Spectrum, Vol. 12, No 4, 2024
7. "Garlic Bulb Decay and Soft Rot Caused by the Cross-Kingdom Pathogen Burkholderia gladioli"
   حمید عباچی, Mahsa Moallem, S Mohsen Taghavi, Mozhde Hamidizade, Ardavan Soleimani, Amal Fazliarab, Perrine Portier, Ebrahim Osdaghi
   PLANT DISEASE, Vol. 108, No 3, pp.684-693, 2024
8. "Epidemiology, Host Resistance, and Genomics of the Small Grain Cereals PathogenXanthomonas translucens: New Advances and Future Prospects"
   Kristi E Ledman, Ebrahim Osdaghi, Rebecca D Curland, Zhaohui Liu, Ruth Dill- Macky
   PHYTOPATHOLOGY, Vol. 113, No 11, pp.2037-2047, 2023
9. "Detection and Diagnosis of Bacterial Leaf Streak on Small Grain Cereals: From Laboratory to Field"
   Ebrahim Osdaghi, S Mohsen Taghavi, Ali Alizadeh Aliabadi, Moein Khojasteh, Hamid Abachi, Mahsa Moallem, Sedighe Mohammadikhah, Syed Mashab Ali Shah, Gongyou Chen, Zhaohui Liu
   PHYTOPATHOLOGY, Vol. 113, No 11, pp.2024-2036, 2023
10. "Comparative Transcriptomic Analysis of Wheat Cultivars in Response to Xanthomonas translucens pv. cerealis and Its T2SS, T3SS, and TALEs Deficient Strains"
    Syed Mashab Ali Shah, Moein Khojasteh, Qii Wang, Fazal Haq, Xiameng Xuu, Ying Lii, Lifang Zou, Ebrahim Osdaghi, Gongyou Chen
    PHYTOPATHOLOGY, Vol. 113, No 11, pp.2073-2082, 2023
11. "Clavibacter lycopersici sp. nov.: a peach-colored actinobacterium isolated from symptomless tomato plant"
    Ebrahim Osdaghi, S Mohsen Taghavi, Mozhde Hamidizade, Amal Fazliarab, Habibeh Hajian Maleki, Xiang Lii, Marie-Agnes Jacques, Perrine Portier
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Vol. 73, No 9, 2023
12. "Field surveys indicate taxonomically diverse Pectobacterium species inducing soft rot of vegetables and annual crops in Iran"
    Sayed Mohammad Reza Parvin, S Mohsen Taghavi, Ebrahim Osdaghi
    PLANT PATHOLOGY, Vol. 72, No 3, 2023
13. "Pathovar-Specific PCR Method for Detection and Identification of Xanthomonas translucens pv. undulosa"
    Hosna Alvandi, S. Mohsen Taghavi, Moein Khojasteh, Touraj Rahimi, Cecile Dutrieux, Geraldine Taghouti, Marie-Agnes Jacques, Perrine Portier, Ebrahim Osdaghi
    PLANT DISEASE, Vol. 121, No 4, 2023
14. "Reassessment of the occurrence and distribution of Xanthomonas arboricola on fruit trees in Iran"
    Sadegh Zarei, Mohsen Taghavi, Ebrahim Osdaghi
    Plant Pathology, Vol. 71, No 11, 2022
15. "Genome-wide meta-QTL analyses provide novel insight into disease resistance repertoires in common bean"
    Asma Rahmanzadeh, Bahman Khahani, Mohsen Taghavi, Moein Khojasteh, Ebrahim Osdaghi
    BMC GENOMICS, Vol. 23, No 1, 2022
16. "Ewingella americana: an Emerging Multifaceted Pathogen of Edible Mushrooms"
    Mozhde Hamidizade, Mohsen Taghavi, Mahsa Moallem, Milad Aeini, Amal Fazliarab, Hamid Abachi, Rachel Herschlag, Kevin Hockett, Carolee Bull, Ebrahim Osdaghi
    PHYTOPATHOLOGY, Vol. 105, No 12, 2022
17. "Clavibacter nebraskensis causing Goss's wilt of maize: Five decades of detaining the enemy in the New World"
    Ebrahim Osdaghi, Alison Robertson, Tamra Jackson-Ziems, Hamid Abachi, Xiang Lii, Robert Harveson
    MOLECULAR PLANT PATHOLOGY, Vol. 23, No 1, 2022
18. "Taxonomic Refinement of Xanthomonas arboricola"
    Sadegh Zarei, S. Mohsen Taghavi, Touraj Rahimi, Hamzeh Mafakheri, Neha Potnis, Ralf Koebnik, Marion Fischer-Le Saux, Joel F. Pothier, Ana Palacio Bielsa, Jaime Cubero, Perrine Portier, Marie-Agnes Jacques, Ebrahim Osdaghi
    PHYTOPATHOLOGY, Vol. 112, No 10, 2022
19. "Xanthomonas bonasiae sp. nov. and Xanthomonas youngii sp. nov., isolated from crown gall tissues"
    Hamzeh Mafakheri, Mohsen Taghavi, Sadegh Zarei, Perrine Portier, Ivica Dimkic, Ralf Koebnik, Nemanja Kuzmanovic, Ebrahim Osdaghi
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Vol. 72, No 6, 2022
20. "Genomic Analyses of Rose Crown Gall-Associated Bacteria Revealed Two New Agrobacterium Species: Agrobacterium burrii sp. nov. and Agrobacterium shirazense sp. nov."
    Hamzeh Mafakheri, S. Mohsen Taghavi, Kamran Khezerpour, Nemanja Kuzmanovic, Ebrahim Osdaghi
    PHYTOPATHOLOGY, Vol. 112, No 6, 2022
21. "Whole Genome Resources of 17 Curtobacterium flaccumfaciens Strains Including Pathotypes of C. flaccumfaciens pv. betae, C. flaccumfaciens pv. oortii and C. flaccumfaciens pv. poinsettiae"
    Ebrahim Osdaghi, Geraldine Taghouti, Cecile Dutrieux, S. Mohsen Taghavi, Amal Fazliarab, Martial Briand, Marion Fischer-Le Saux, Perrine Portier, Marie-Agnes Jacques
    MOLECULAR PLANT-MICROBE INTERACTIONS, Vol. 35, No 4, 2022
22. "Bacterial ring rot of potato caused by Clavibacter sepedonicus : A successful example of defeating the enemy under international regulations"
    Ebrahim Osdaghi, Jan M van der Wolf, Hamid Abachi, Xiang Lii, Solke H De Boer, Carol A Ishimaru
    MOLECULAR PLANT PATHOLOGY, Vol. 35, No 4, 2022
23. "Phenotypic and Molecular-Phylogenetic Analyses Reveal Distinct Features of Crown Gall-Associated Xanthomonas Strains"
    Hamzeh Mafakheri, S. Mohsen Taghavi, Sadegh Zarei, Touraj Rahimi, Mohammad Sadegh Hasannezhad, Perrine Portier, Marion Fischer-Le Saux, Ivica Dimkic, Ralf Koebnik, Nemanja Kuzmanovic, Ebrahim Osdaghi
    Microbiology Spectrum, Vol. 10, No 1, 2022
24. "Xanthomonas hortorum – beyond gardens: Current taxonomy, genomics, and virulence repertoires"
    Nay C. Dia, Lucas Moriniere, Bart Cottyn, Eduardo Bernal, Jonathan M. Jacobs, Ralf Koebnik, Ebrahim Osdaghi, Neha Potnis, Joel Pothier
    MOLECULAR PLANT PATHOLOGY, Vol. 23, No 3, 2022
25. "First Report of Brown Spot on White Button Mushroom (Agaricus bisporus) Caused by Cedecea neteri in Iran"
    Mozhde Hamidizade, S. Mohsen Taghavi, Hamzeh Mafakheri, Rachel A Herschlag, Samuel J. Martins, Kevin L. Hockett, Carolee T. Bull, Ebrahim Osdaghi
    PLANT DISEASE, Vol. 105, No 12, 2021
26. "A centenary for bacterial spot of tomato and pepper"
    Ebrahim Osdaghi, Jeffrey B. Jones, Anuj Sharma, Erica M. Goss, Peter Abrahamian, Eric A. Newberry, Neha Potnis, Renato Carvalho, Manoj Choudhary, Mathews L. Paret, Sujan Timilsina, Gary E. Vallad
    MOLECULAR PLANT PATHOLOGY, Vol. 22, No 11, 2021
27. "Occurrence of Crown Gall Disease on Japanese Spindle (Euonymus japonicas var. Green Rocket) Caused by Agrobacterium rosae in Iran"
    Hamzeh Mafakheri, S. Mohsen Taghavi, Sadegh Zarei, Nemanja Kuzmanovic, Ebrahim Osdaghi
    PLANT DISEASE, Vol. 105, No 6, 2021
28. "Ralstonia solanacearum (bacterial wilt of potato)."
    Ebrahim Osdaghi
    Invasive species compendium, Vol. 2021, No 45009, 2021
29. "Genomics-Enabled Novel Insight Into the Pathovar-Specific Population Structure of the Bacterial Leaf Streak Pathogen Xanthomonas translucens in Small Grain Cereals"
    Syed Mashab Ali Shah, Moein Khojasteh, Qi Wang, S. Mohsen Taghavi, Zhengyin Xuu, Pejman Khodaygan, Lifang Zou, Sedighe Mohammadikhah, Gongyou Chen, Gongyou Chen, Ebrahim Osdaghi
    Frontiers in Microbiology, Vol. 12, No 12, 2021
30. "Complete Genome Sequencing Provides Novel Insight Into the Virulence Repertories and Phylogenetic Position of Dry Beans Pathogen Curtobacterium flaccumfaciens pv. flaccumfaciens"
    Gongyou chen, Moein Khojasteh, Ayat Taheri Dehkordi, Rahimi Touraj, Seyed Mohsen Taghavi, Ebrahim Osdaghi
    PHYTOPATHOLOGY, Vol. 111, No 2, pp.268-280, 2021
31. "A Powerful LAMP Weapon against the Threat of the Quarantine Plant Pathogen Curtobacterium flaccumfaciens pv. flaccumfaciens"
    Stefania Tegli, Carola Biancalani, Aleksandr N. Ignatov, Ebrahim Osdaghi
    MICROORGANISMS, Vol. 8, No 11, 2020

Conference Paper

1. "Isolation and Identification of Crown Gall-Associated Xanthomonas Strains"
   حمزه مفاخری, محسن تقوی, صادق زارعی, Ebrahim Osdaghi
   The second Congress of Pathology Plant of Iran, 2022
2. "Distribution of bacterial canker of tomato in field and seedling production greenhouses in Iran"
   ملیحه حقوردی, محسن تقوی, حمزه مفاخری, صادق زارعی, Ebrahim Osdaghi
   The second Congress of Pathology Plant of Iran, 2022
3. "First report of Pseudomonas agarici on edible mushrooms in Iran"
   مهسا معلم, میلاد ایینی, مژده حمیدی زاده, امل فضلی عرب, حمید عباچی, Ebrahim Osdaghi
   The second Congress of Pathology Plant of Iran, 2022