مقالات علمی چاپ شده در مجلات

1. "Engineered red Opto-mGluR6 Opsins, a red-shifted optogenetic excitation tool, an in vitro study"
   Hoda Shamsnajafabadi, Zahra-Soheila Soheili, Mehdi Sadeghi, Shahram Samiee, Pouria Ghasemi, Mohammad Ismail Zibaii, Hamid Gholami Pourbadie, Hamid Ahmadieh, Ehsan Ranaei Pirmardan, Najmeh Salehi, Dorsa Samiee, Ali Kashanian
   PLoS One, Vol. 19, No 10, 2024
2. "P-Sulfonatocalix[4]arene turns peptide aggregates into an efficient cell-penetrating peptide"
   Mahsima Heydari, Najmeh Salehi, Reza Zadmard, Werner M Nau, Khosro Khajeh, Zahra Azizi, Amir Norouzy
   RSC Advances, Vol. 14, No 44, 2024
3. "Identification of key lncRNAs associated with oxaliplatin resistance in colorectal cancer cells and isolated exosomes: From In-Silico prediction to In-Vitro validation"
   Roxana Sahebnasagh, Hoda Deli, Amir Shadboorestan, Zeynab Vakili-Ghartavol, Najmeh Salehi, Tahereh Komeili-Movahhed, Zahra Azizi, Mohammad Hossein Ghahremani
   PLoS One, Vol. 19, No 10, 2024
4. "The Effect of Vitamin D Deficiency on Immune-Related Hub Genes: A Network Analysis Associated With Type 1 Diabetes"
   Safin Hussein, Fatemeh Bandarian, Najmeh Salehi, Ali Mosadegh Khah, Elahe Motevaseli, Zahra Azizi
   CUREUS JOURNAL OF MEDICAL SCIENCE, Vol. 16, No 9, 2024
5. "A novel missense variant in PNLDC1 associated with nonobstructive azoospermia"
   Mouness Rahimian, Masomeh Askari, Najmeh Salehi, Mojtaba Jaafarinia, Mohsen Forouzanfar, Navid Almadani, Andrea Riccio, Mehdi Totonchi
   JOURNAL OF GENETICS, Vol. 103, No 2, 2024
6. "Comprehensive integrated single-cell RNA sequencing analysis of brain metastasis and glioma microenvironment: Contrasting heterogeneity landscapes"
   Seyedeh Fatemeh Sajjadi, Najmeh Salehi, Mehdi Sadeghi
   PLoS One, Vol. 19, No 7, 2024
7. "Atypical presentations in an RTD patient and report of novel SLC52A3 and SLC52A2 mutations"
   Donya Sabeghi, Kolsoum Inanloorahatloo, هانیه میرزایی , Marziyeh Khani, Hosein Shamshiri, ترنم تقوی, Afagh Alavi, رضا بوستانی , Seyed Hassan Tonekaboni, Javad Akhondian, Masoomah Ebrahimi, Najmeh Salehi, شهریار نفیسی, Elaheh Elahi
   ACTA NEUROLOGICA BELGICA, Vol. 124, No 4, 2024
8. "Identification of a mutation in TNRC18 in a patient with clinical features of Fazio‐Londe disease"
   Marziyeh Khani, Hosein Shamshiri, شهریار نفیسی, Najmeh Salehi, Elahe Allahi
   Clinical Case Reports, Vol. 12, No 1, 2024
9. "Integrated bioinformatic analysis of differentially expressed genes associated with wound healing"
   Mansoureh Farhangniya, Farzaneh Mohamadi Farsani, Najmeh Salehi, Ali Samadikuchaksaraei
   Cell Journal, Vol. 25, No 12, 2023
10. "The construction of a testis transcriptional cell atlas from embryo to adult reveals various somatic cells and their molecular roles"
    Najmeh Salehi, مهدی توتونچی
    Journal of Translational Medicine, Vol. 21, No 1, 2023
11. "A novel missense variant in CDK5RAP2 associated with non-obstructive azoospermia"
    Mouness Rahimian, Masomeh Askari, Najmeh Salehi, Andrea Riccio, Mojtaba Jaafarinia, Navid Almadani, Mehdi Totonchi
    Taiwanese Journal of Obstetrics & Gynecology, Vol. 62, No 6, pp.830-837, 2023
12. "DrugRep-HeSiaGraph: when heterogenous siamese neural network meets knowledge graphs for drug repurposing"
    Zahra Ghorbanali, Fatemeh Zare-Mirakabad, Najmeh Salehi, Ali Masoudi-Nejad
    BMC BIOINFORMATICS, Vol. 24, No 1, 2023
13. "DrugRep-KG: Toward Learning a Unified Latent Space for Drug Repurposing Using Knowledge Graphs"
    Zahra GhorbanAli, Fatemeh Zare-Mirakabad, محمد اکبری, Najmeh Salehi, Ali Masoudi-Nejad
    Journal of Chemical Information and Modeling, Vol. 63, No 8, pp.2532-2545, 2023
14. "Biomarker prediction in autism spectrum disorder using a network-based approach"
    Maryam Rastegari, Najmeh Salehi, Fatemeh Zare-Mirakabad
    BMC MEDICAL GENOMICS, Vol. 16, No 1, 2023
15. "Fluorescence labeling of anchor‐modified Mart‐1 peptide for increasing its affinity for HLA‐A*0201: Hit two targets with one arrow"
    Pooya Fattahi, Najmeh Salehi, Zahra Azizi, Javad Mohammadi, Amir Norouzy, Seyed Mohammad Moazzeni
    JOURNAL OF PEPTIDE SCIENCE, Vol. 29, No 9, 2023
16. "Thermal stability enhancement: Fundamental concepts of protein engineering strategies to manipulate the flexible structure"
    Mahdie Rahban, S.. Zolghadri, Najmeh Salehi, F.. Ahmad, T.. Haertle, N.. Rezaei-ghaleh, L.. Sawyer, Ali Akbar Saboury
    International Journal of Biological Macromolecules, Vol. 214, No 1, pp.642-654, 2022
17. "Novel STAG3 variant associated with primary ovarian insufficiency and non-obstructive azoospermia in an Iranian consanguineous family"
    Arvand Akbari, Seyedeh Zoha Tabatabae, Najmeh Salehi, Kimiya Padidar, Navid Almadani, Mohammad Ali Sadighi Gilani, Mehri Mashayekhi, Elahe Motevasel, mehdi totonchi
    GENE, Vol. 821, No 1, 2022
18. "A Novel Missense Variant in Actin Binding Domain of MYH7 Is Associated With Left Ventricular Noncompaction"
    Mahdi Hesaraki, Seyed Ahmad Mousavi, Ugur Bora, Najmeh Salehi, Sara Pahlavan, Maryam Barekat, Seyed Javad Rasouli, Hossein Baharvand, Gunes Ozhan, مهدی توتونچی
    Frontiers in Cardiovascular Medicine, Vol. 9, No 1, 2022
19. "A rare frameshift mutation inSYCP1is associated with human male infertility"
    Soheila Nabi, Masomeh Askari, Maryam Rezaei-Gazik, Najmeh Salehi, Navid Almadan, Yaser Tahamtani, مهدی توتونچی
    MOLECULAR HUMAN REPRODUCTION, Vol. 28, No 4, 2022
20. "Integration and gene co-expression network analysis of scRNA-seq transcriptomes reveal heterogeneity and key functional genes in human spermatogenesis"
    Najmeh Salehi, Mohammad Hossein Karimi-jafari, مهدی توتونچی, امیر امیری یکتا
    Scientific Reports, Vol. 11, No 1, 2021
21. "The penicillin binding protein 1A of Helicobacter pylori, its amoxicillin binding site and access routes"
    Bahareh Attaran, Najmeh Salehi, Bahareh Ghadiri, Maryam Esmaeili, Shadi Kalateh, Mohammad Tashakoripour, Mahmoud Eshagh Hosseini, مرجان محمدی
    Gut Pathogens, Vol. 13, No 1, 2021
22. "Rare missense variant inMSH4associated with primary gonadal failure in both 46, XX and 46, XY individuals"
    Arvand Akbari, Kimia Padidar, Najmeh Salehi, Mehri Mashayekhi, Navid Almadani, Mohammad Ali Sadighi Gilani, Anu Bashambou, Ken McElreavey, مهدی توتونچی
    HUMAN REPRODUCTION, Vol. 36, No 4, pp.1134-1145, 2021
23. "Profiling of Initial Available SARS-CoV-2 Sequences from Iranian Related COVID-19 Patients"
    Najmeh Salehi, امیر امیری یکتا, مهدی توتونچی
    Cell Journal, Vol. 22, No 1, 2020
24. "Biallelic variant in cyclin B3 is associated with failure of maternal meiosis II and recurrent digynic triploidy"
    Nayeralsadat Fatemi, Najmeh Salehi, Laura Pignata, Pietro Palumbo, Maria Vittoria, Fariba Ramazanali, Pierre Ray, Maryam Varkiani, Fakhreddin Reyhani-Sabet, Alireza Biglari, Angela Sparago, Basilia Acurzio, Orazio Palumbo, Massimo Carella, Andrea Riccio, mehdi totonchi
    JOURNAL OF MEDICAL GENETICS, Vol. 58, No 11, pp.783-788, 2020
25. "The outward shift of clarithromycin binding to the ribosome in mutantHelicobacter pyloristrains"
    Najmeh Salehi, Bahareh Attarn, Fatemeh Zare-Mirakabad, Bahare Ghadiri, Maryam Esmaeili, Mohadeseh Shakaram, Mohammad Tashakoripour, Mahmoud Eshagh Hosseini, مرجان محمدی
    HELICOBACTER, Vol. 25, No 6, 2020
26. "New insights into resistance of Helicobacter pylori against third‐ and fourth‐generation fluoroquinolones: A molecular docking study of prevalent GyrA mutations"
    Najmeh Salehi, Bahareh Attarn, Negin Eskini, Maryam Esmaeili, Atefeh Sharifirad, مهدی صادقی, مرجان محمدی
    HELICOBACTER, Vol. 24, No 5, 2019
27. "Biological evaluation of 9-(1H-Indol-3-yl) xanthen-4-(9H)-ones derivatives as noncompetitive α-glucosidase inhibitors: kinetics and molecular mechanisms"
    Maryam Nourisefat, Najmeh Salehi, Saeed Yousefinejad, Farhad Panahi, Massoud Amanlou, کوثر باقرزاده , علی خلفی نژاد , Mohammad Hossein Karimi-jafari, Nader Sheibani, Ali Akbar Moosavi Movahhedi
    STRUCTURAL CHEMISTRY, Vol. -, 2018
28. "Histidine substitution in the most flexible fragments of firefly luciferase modifies its thermal stability"
    Mahdie Rahban, Najmeh Salehi, Ali Akbar Saboury, Saman Hosseinkhani, Mohammad Hossein Karimi-jafari, R.. Firouzi, N.. Rezaei-ghaleh, Ali Akbar Moosavi Movahhedi
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, Vol. 629, No 1, pp.8-18, 2017
29. "Application of merged spectroscopic data combined with chemometric analysis for resolution of hemoglobin intermediates during chemical unfolding"
    Leila Fotouhi, Saeed Yousefinejad, Najmeh Salehi, Ali Akbar Saboury, Nader Sheibani, Ali Akbar Moosavi Movahhedi
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, Vol. 136, No 136, pp.1974-1981, 2015
30. "Heme degradation upon production of endogenous hydrogen peroxide via interaction of hemoglobin with sodium dodecyl sulfate"
    Najmeh Salehi, Ali Akbar Moosavi Movahhedi, Leila Fotohi, S.. Yousefinejad, M.. Shourian, Reza Hosseinzadeh, Nader Sheibani, Mehran Habibi Rezaei
    JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY, Vol. 133, No 133, pp.11-17, 2014

مقالات علمی ارائه شده در همایش‌ها

1. "Unlocking the Hidden Potential of Leuconostoc: Insights from Genomic Analysis"
   بهرام باسامی, Niloofar Zamanpour, Najmeh Salehi, Javad Hamedi
   4th international and 13th national Iranian Conference on Bioinformatics, 2025
2. "Exploring the Antibiotic Potential of Micromonospora"
   Niloofar Zamanpour, Najmeh Salehi, Javad Hamedi
   4th international and 13th national Iranian Conference on Bioinformatics, 2025
3. "Single-Cell Transcriptomic Analysis Reveals Cellular Heterogeneity and Molecular Markers in Acute Leukemia Subtypes"
   Fatemeh Mohagheghian, Zahra Salehi, Najmeh Salehi
   4th international and 13th national Iranian Conference on Bioinformatics, 2025
4. "Genome mining of non-ribosomal peptides in Micromonospora genus"
   Niloofar Zamanpour, Najmeh Salehi, Javad Hamedi
   Iran's 5th conference on Protein and Peptide Science, 2024
5. "Substitution of His by Asp modify thermal stability of Firefly luciferase"
   Mahdie Rahban, Najmeh Salehi, Mohammad Hossein Karimi-jafari, Ali Akbar Saboury, سامان حسینخانی, Ali Akbar Moosavi Movahhedi
   15th CBC Conference on Biophysical Chemistry, Gorgan, Iran, 2018
6. "Substitution of His by lysine and aspartate in the flexible fragment of Luciferase"
   Mahdiyeh Rahban, Najmeh Salehi, Mohammad Hossein Karimi-jafari, Ali Akbar Saboury, Saman Hosseinkhani, Ali Akbar Moosavi Movahhedi
   3rd IASBS Symposium in Biological Sciences, 2017
7. "Construction of Structural Libraries for Intrinsically Disordered Proteins"
   Najmeh Salehi, Rohouhllah Firouzi, Mohammad Hossein Karimi-jafari
   The 6th Conference on Bioinformatics, 2016
8. "A Simulated Annealing - Molecular Dynamic Approach for Conformational Sampling of full-length Amyloid-beta Peptide"
   Najmeh Salehi, R.. Nasrollahtabar, Mohammad Hossein Karimi-jafari, R.. Firouzi
   18th Iranian Physical Chemistry Conference, 2016
9. "Study of heme degradation and ROS production upon interaction of hemoglobin with n-alkyl sulfates"
   Leila Fotouhi, Ali Akbar Saboury, Najmeh Salehi, Mostafa Shourian, Mehran Habibi Rezaei, Ali Akbar Moosavi Movahhedi
   12th International School of Biophysics, 2014
10. "Heme degradation by interaction of hemoglobin with sodium dodecyl sulfate"
    Najmeh Salehi, L.. Fotouhi, Najmeh Poursasan , Mehran Habibi Rezaei, Ali Akbar Moosavi Movahhedi
    1st Tabriz International Life Science & 12th Iran Biophysical Chemistry Conference, 2013
11. "Structural and functional survey on interaction of human hemoglobin with n-alkyl sulfates homologues"
    L.. Fotouhi, Najmeh Salehi, Ali Akbar Saboury, Ali Akbar Moosavi Movahhedi
    First Tabriz International Life Science & 12nd Iranian Biophysical Chemistry Conference, 2013
12. "Reconsidering the Anti-Glycation Activity of Acetylsalicylate on Bovine Serum Albumin"
    S Nemati, Mehran Habibi Rezaei, MH Amanlou, Najmeh Salehi, Ali Akbar Moosavi Movahhedi
    The First International 11th Iran Biophysical Chemistry Conference, 2012